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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs150759448 chr20:30242201 G/A 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs1560008 chr12:9808069 G/C 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs16836160 chr2:201813830 G/A 2.98E-7 67 24.77 27.9 1.27 KM Plot
UVM rs16836202 chr2:201793024 AGCT/A 2.98E-7 67 24.77 27.9 1.27 KM Plot
UVM rs16913477 chr12:9812413 C/T 0.000125 67 7.6 21.8 27.88 KM Plot
UVM rs16968682 chr17:37386899 A/G 1.7E-7 67 0.32 35.5 26.55 KM Plot
UVM rs17093661 chr20:30429158 T/C 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs17253922 chr20:30287696 C/T 0.000118 67 7.6 8.18 27.92 KM Plot
UVM rs17339879 chr20:30370892 A/G 0.000118 67 7.6 8.18 27.92 KM Plot
UVM rs17671194 chr15:40667539 T/C 5.12E-7 66 26.55 24.87 1.27 KM Plot
UVM rs17746659 chr15:40859951 C/A 0.000227 67 27.87 26.12 16.78 KM Plot
UVM rs17747399 chr15:40909696 T/C 1.26E-5 67 27.87 24.87 17.07 KM Plot
UVM rs17749179 chr15:29417057 C/T 7.23E-5 67 7.6 40.1 26.13 KM Plot
UVM rs1977117 chr1:84275319 A/G 0.000638 67 26.5 27.93 17.1 KM Plot
UVM rs2110728 chr2:201965678 G/A 3.74E-7 66 24.62 27.9 1.27 KM Plot